Application of informatics systems in medicine- bioinformatics

Authors

Keywords:

application of informatics, MATLAB, Bioinformatyka

Abstract

Special This paper discusses Toolbox Bioinformatica included in MATLAB software as well as its application for the processing of very big data base resources containing information on various DNA types, enzymes, genes etc. This Toolbox makes it possible to scan DNA data base for similar code sequences, scan for differences between particular organisms and defining their origins. It gives tools for analysis of virii, and diseases, and makes it possible to study incurable since now, diseases, as, Parkinson disease, or cancer disease (of various organs). For this purpose, specialised programming languages are used e.g., BioPerl, BioJava, BioPython, BioRuby, BioPipe, BioSQL/OBDA.

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References

Watała C.: Biostatystyka – wykorzystanie metod statystycznych w pracy badawczej w naukach biomedycznych, Alfa- medica 2002 Łódź

http://www.mariner.hg.pl/strony/bioinformatyka/

http://www.lmb.uni-muenchen.de/groups/bioinformatics/bioinfo.html

http://www.geocities.com/bioinformaticsweb/tutorial.html

http://www.bioperl.org/

http://www.ensembl.org/Docs/enstour/

http://www.wiw.pl/Biologia/Genetyka/JezykGenow/Esej.asp?base=r&cp=1&ce=35

http://www.ncbi.nlm.nih.gov/entrez/

ExPASy http://www.expasy.org/

Swiss-Prot database http://www.expasy.org/sprot/

NCBI http://www.ncbi.nlm.nih.gov/

EBI http://www.ebi.ac.uk

GenomeNet http://www.genome.ad.jp/

EMBNet http://www.ch.embnet.org/

Protein Data Bank (PDB) http://www.rcsb.org/pdb/ index.html

DBTSS: Database of Transcriptional Start Sites http://dbtss.hgc.jp/index.html

Human Genome Centers and Contacts: Baylor College of Medicine Human Genome Center: http://www.hgsc. bcm.tmc.edu

http://genome1.ccc.columbia.edu/%7Egenome

http://lpg.nci.nih.gov/CHLC

http://eri.uchsc.edu/chromosome21

http://www.cephb.fr/

http://www.genethon.fr/genethon_en.html

http://www.ncbi.nlm.nih.gov/BLAST/

SWISS-MODEL http://www.expasy.org/swissmod/ SWISS-MODEL.html

ACCELRYS http://www.accelrys.com/

Tripos http://www.tripos.com

FQS Semihomology tool http://www.fqspl.com.pl/sh/

Pedro's BioMolecular Research Tools http:// www. biophys. uniduesseldorf. de/ BioNet/ Pedro /research_ tools.html

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Published

2005-09-30

How to Cite

Mazur, D. (2005). Application of informatics systems in medicine- bioinformatics. European Journal of Clinical and Experimental Medicine, 3(3), 284–293. Retrieved from https://journals.ur.edu.pl/ejcem/article/view/13459

Issue

Vol. 3 No. 3 (2005): Medical Journal of the Rzeszow University

Section

REVIEW PAPERS

License

Copyright (c) 2005 Medical Journal of the Rzeszow University

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